| addChebyshevReaction(ChebyshevReaction2 &r) | GasKinetics | protected |
| addElementaryReaction(ElementaryReaction2 &r) (defined in BulkKinetics) | BulkKinetics | protectedvirtual |
| addFalloffReaction(FalloffReaction2 &r) | GasKinetics | protected |
| addPhase(ThermoPhase &thermo) | Kinetics | virtual |
| addPlogReaction(PlogReaction2 &r) | GasKinetics | protected |
| addReaction(shared_ptr< Reaction > r, bool resize=true) | GasKinetics | virtual |
| addThirdBody(shared_ptr< Reaction > r) (defined in BulkKinetics) | BulkKinetics | |
| addThreeBodyReaction(ThreeBodyReaction2 &r) | GasKinetics | protected |
| assertDerivativesValid(const std::string &name) | GasKinetics | protected |
| BulkKinetics(ThermoPhase *thermo=0) (defined in BulkKinetics) | BulkKinetics | |
| checkDuplicates(bool throw_err=true) const | Kinetics | virtual |
| checkDuplicateStoich(std::map< int, double > &r1, std::map< int, double > &r2) const | Kinetics | protected |
| checkPhaseArraySize(size_t mm) const | Kinetics | |
| checkPhaseIndex(size_t m) const | Kinetics | |
| checkReactionArraySize(size_t ii) const | Kinetics | |
| checkReactionBalance(const Reaction &R) | Kinetics | protected |
| checkReactionIndex(size_t m) const | Kinetics | |
| checkSpeciesArraySize(size_t mm) const | Kinetics | |
| checkSpeciesIndex(size_t k) const | Kinetics | |
| concm_3b_values | GasKinetics | protected |
| concm_falloff_values | GasKinetics | protected |
| creationRates_ddX() | Kinetics | |
| destructionRates_ddX() | Kinetics | |
| falloff_work | GasKinetics | protected |
| fwdRatesOfProgress_ddX() | GasKinetics | virtual |
| GasKinetics(ThermoPhase *thermo=0) | GasKinetics | |
| getActivityConcentrations(doublereal *const conc) | Kinetics | inlinevirtual |
| getCreationRates(doublereal *cdot) | Kinetics | virtual |
| getCreationRates_ddC(double *dwdot) | Kinetics | |
| getCreationRates_ddP(double *dwdot) | Kinetics | |
| getCreationRates_ddT(double *dwdot) | Kinetics | |
| getDeltaElectrochemPotentials(doublereal *deltaM) | Kinetics | inlinevirtual |
| getDeltaEnthalpy(doublereal *deltaH) | BulkKinetics | virtual |
| getDeltaEntropy(doublereal *deltaS) | BulkKinetics | virtual |
| getDeltaGibbs(doublereal *deltaG) | BulkKinetics | virtual |
| getDeltaSSEnthalpy(doublereal *deltaH) | BulkKinetics | virtual |
| getDeltaSSEntropy(doublereal *deltaS) | BulkKinetics | virtual |
| getDeltaSSGibbs(doublereal *deltaG) | BulkKinetics | virtual |
| getDerivativeSettings(AnyMap &settings) const | GasKinetics | virtual |
| getDestructionRates(doublereal *ddot) | Kinetics | virtual |
| getDestructionRates_ddC(double *dwdot) | Kinetics | |
| getDestructionRates_ddP(double *dwdot) | Kinetics | |
| getDestructionRates_ddT(double *dwdot) | Kinetics | |
| getEquilibriumConstants(doublereal *kc) | GasKinetics | virtual |
| getFwdRateConstants(double *kfwd) | GasKinetics | virtual |
| getFwdRateConstants_ddC(double *dkfwd) | GasKinetics | virtual |
| getFwdRateConstants_ddP(double *dkfwd) | GasKinetics | virtual |
| getFwdRateConstants_ddT(double *dkfwd) | GasKinetics | virtual |
| getFwdRatesOfProgress(doublereal *fwdROP) | Kinetics | virtual |
| getFwdRatesOfProgress_ddC(double *drop) | GasKinetics | virtual |
| getFwdRatesOfProgress_ddP(double *drop) | GasKinetics | virtual |
| getFwdRatesOfProgress_ddT(double *drop) | GasKinetics | virtual |
| getNetProductionRates(doublereal *wdot) | Kinetics | virtual |
| getNetProductionRates_ddC(double *dwdot) | Kinetics | |
| getNetProductionRates_ddP(double *dwdot) | Kinetics | |
| getNetProductionRates_ddT(double *dwdot) | Kinetics | |
| getNetRatesOfProgress(doublereal *netROP) | Kinetics | virtual |
| getNetRatesOfProgress_ddC(double *drop) | GasKinetics | virtual |
| getNetRatesOfProgress_ddP(double *drop) | GasKinetics | virtual |
| getNetRatesOfProgress_ddT(double *drop) | GasKinetics | virtual |
| getReactionDelta(const double *property, double *deltaProperty) const | Kinetics | virtual |
| getRevRateConstants(double *krev, bool doIrreversible=false) | BulkKinetics | virtual |
| getRevRatesOfProgress(doublereal *revROP) | Kinetics | virtual |
| getRevRatesOfProgress_ddC(double *drop) | GasKinetics | virtual |
| getRevRatesOfProgress_ddP(double *drop) | GasKinetics | virtual |
| getRevRatesOfProgress_ddT(double *drop) | GasKinetics | virtual |
| getRevReactionDelta(const double *g, double *dg) const | Kinetics | virtual |
| getThirdBodyConcentrations(double *concm) | GasKinetics | virtual |
| init() | Kinetics | inlinevirtual |
| invalidateCache() (defined in GasKinetics) | GasKinetics | virtual |
| isReversible(size_t i) | BulkKinetics | virtual |
| Kinetics() | Kinetics | |
| Kinetics(const Kinetics &)=delete | Kinetics | |
| kineticsSpeciesIndex(size_t k, size_t n) const | Kinetics | inline |
| kineticsSpeciesIndex(const std::string &nm) const | Kinetics | |
| kineticsSpeciesIndex(const std::string &nm, const std::string &ph) const | Kinetics | |
| kineticsSpeciesName(size_t k) const | Kinetics | |
| kineticsType() const | GasKinetics | inlinevirtual |
| m_3b_concm | GasKinetics | protected |
| m_act_conc | BulkKinetics | protected |
| m_bulk_rates | BulkKinetics | protected |
| m_bulk_types | BulkKinetics | protected |
| m_cache | Kinetics | protected |
| m_cheb_rates | GasKinetics | protected |
| m_concm | BulkKinetics | protected |
| m_delta_gibbs0 | Kinetics | protected |
| m_dH | Kinetics | protected |
| m_dn | BulkKinetics | protected |
| m_fallindx | GasKinetics | protected |
| m_falloff_concm | GasKinetics | protected |
| m_falloff_high_rates | GasKinetics | protected |
| m_falloff_low_rates | GasKinetics | protected |
| m_falloffn | GasKinetics | protected |
| m_grt (defined in BulkKinetics) | BulkKinetics | protected |
| m_irrev | BulkKinetics | protected |
| m_jac_rtol_delta (defined in GasKinetics) | GasKinetics | protected |
| m_jac_skip_falloff (defined in GasKinetics) | GasKinetics | protected |
| m_jac_skip_third_bodies | GasKinetics | protected |
| m_kk | Kinetics | protected |
| m_legacy | GasKinetics | protected |
| m_logStandConc (defined in GasKinetics) | GasKinetics | protected |
| m_mindim | Kinetics | protected |
| m_multi_concm | BulkKinetics | protected |
| m_perturb | Kinetics | protected |
| m_phaseindex | Kinetics | protected |
| m_phys_conc | BulkKinetics | protected |
| m_plog_rates | GasKinetics | protected |
| m_pres | GasKinetics | protected |
| m_productStoich | Kinetics | protected |
| m_rates | BulkKinetics | protected |
| m_rbuf | Kinetics | protected |
| m_rbuf0 | GasKinetics | protected |
| m_rbuf1 (defined in GasKinetics) | GasKinetics | protected |
| m_rbuf2 (defined in GasKinetics) | GasKinetics | protected |
| m_reactantStoich | Kinetics | protected |
| m_reactions | Kinetics | protected |
| m_ready | Kinetics | protected |
| m_revindex | BulkKinetics | protected |
| m_revProductStoich | Kinetics | protected |
| m_rfallindx | GasKinetics | protected |
| m_rfn | Kinetics | protected |
| m_rfn_high | GasKinetics | protected |
| m_rfn_low | GasKinetics | protected |
| m_rkcn | Kinetics | protected |
| m_root | Kinetics | protected |
| m_ROP_ok (defined in BulkKinetics) | BulkKinetics | protected |
| m_ropf | Kinetics | protected |
| m_ropnet | Kinetics | protected |
| m_ropr | Kinetics | protected |
| m_rxnphase | Kinetics | protected |
| m_sbuf0 (defined in GasKinetics) | GasKinetics | protected |
| m_skipUndeclaredSpecies | Kinetics | protected |
| m_skipUndeclaredThirdBodies | Kinetics | protected |
| m_start | Kinetics | protected |
| m_state (defined in GasKinetics) | GasKinetics | protected |
| m_stoichMatrix | Kinetics | protected |
| m_surfphase | Kinetics | protected |
| m_temp (defined in BulkKinetics) | BulkKinetics | protected |
| m_thermo | Kinetics | protected |
| modifyChebyshevReaction(size_t i, ChebyshevReaction2 &r) | GasKinetics | protected |
| modifyElementaryReaction(size_t i, ElementaryReaction2 &rNew) (defined in BulkKinetics) | BulkKinetics | protectedvirtual |
| modifyFalloffReaction(size_t i, FalloffReaction2 &r) | GasKinetics | protected |
| modifyPlogReaction(size_t i, PlogReaction2 &r) | GasKinetics | protected |
| modifyReaction(size_t i, shared_ptr< Reaction > rNew) | GasKinetics | virtual |
| modifyThreeBodyReaction(size_t i, ThreeBodyReaction2 &r) | GasKinetics | protected |
| multiplier(size_t i) const | Kinetics | inline |
| netProductionRates_ddX() | Kinetics | |
| netRatesOfProgress_ddX() | GasKinetics | virtual |
| nPhases() const | Kinetics | inline |
| nReactions() const | Kinetics | inline |
| nTotalSpecies() const | Kinetics | inline |
| operator=(const Kinetics &)=delete (defined in Kinetics) | Kinetics | |
| parameters() | Kinetics | |
| phaseIndex(const std::string &ph) const | Kinetics | inline |
| process_ddC(StoichManagerN &stoich, const vector_fp &in, double *drop, bool mass_action=true) | GasKinetics | protected |
| process_ddP(const vector_fp &in, double *drop) | GasKinetics | protected |
| process_ddT(const vector_fp &in, double *drop) | GasKinetics | protected |
| process_ddX(StoichManagerN &stoich, const vector_fp &in) | GasKinetics | protected |
| processEquilibriumConstants(double *rop) | GasKinetics | protected |
| processEquilibriumConstants_ddT(double *drkcn) | GasKinetics | protected |
| processFalloffReactions(double *ropf) | GasKinetics | protected |
| processFwdRateCoefficients(double *ropf) | GasKinetics | protected |
| processThirdBodies(double *rop) | GasKinetics | protected |
| productOrder(int k, int i) const | Kinetics | inlinevirtual |
| productStoichCoeff(size_t k, size_t i) const | Kinetics | virtual |
| productStoichCoeffs() const | Kinetics | inline |
| productString(size_t i) const | Kinetics | |
| reactantOrder(size_t k, size_t i) const | Kinetics | inlinevirtual |
| reactantStoichCoeff(size_t k, size_t i) const | Kinetics | virtual |
| reactantStoichCoeffs() const | Kinetics | inline |
| reactantString(size_t i) const | Kinetics | |
| reaction(size_t i) | Kinetics | |
| reaction(size_t i) const (defined in Kinetics) | Kinetics | |
| reactionEnthalpy(const Composition &reactants, const Composition &products) | Kinetics | virtual |
| reactionPhaseIndex() const | Kinetics | inline |
| reactionString(size_t i) const | Kinetics | |
| reactionType(size_t i) const | Kinetics | virtual |
| reactionTypeStr(size_t i) const | Kinetics | virtual |
| resizeReactions() | GasKinetics | virtual |
| resizeSpecies() | BulkKinetics | virtual |
| revProductStoichCoeffs() const | Kinetics | inline |
| revRatesOfProgress_ddX() | GasKinetics | virtual |
| selectPhase(const double *data, const ThermoPhase *phase, double *phase_data) | Kinetics | |
| setDerivativeSettings(const AnyMap &settings) | GasKinetics | virtual |
| setMultiplier(size_t i, double f) | BulkKinetics | virtual |
| setRoot(std::shared_ptr< Solution > root) | Kinetics | inlinevirtual |
| skipUndeclaredSpecies(bool skip) | Kinetics | inline |
| skipUndeclaredSpecies() const (defined in Kinetics) | Kinetics | inline |
| skipUndeclaredThirdBodies(bool skip) | Kinetics | inline |
| skipUndeclaredThirdBodies() const (defined in Kinetics) | Kinetics | inline |
| speciesPhase(const std::string &nm) | Kinetics | |
| speciesPhase(const std::string &nm) const (defined in Kinetics) | Kinetics | |
| speciesPhase(size_t k) | Kinetics | inline |
| speciesPhaseIndex(size_t k) const | Kinetics | |
| surfacePhaseIndex() const | Kinetics | inline |
| thermo(size_t n=0) | Kinetics | inline |
| thermo(size_t n=0) const (defined in Kinetics) | Kinetics | inline |
| thirdBodyConcentrations() const | GasKinetics | inlinevirtual |
| update_rates_C() | GasKinetics | virtual |
| update_rates_T() | GasKinetics | virtual |
| updateKc() | GasKinetics | protected |
| updateROP() (defined in GasKinetics) | GasKinetics | virtual |
| ~Kinetics() (defined in Kinetics) | Kinetics | virtual |
