EigenSparseJacobian.h

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//! @file EigenSparseJacobian.h
 
// This file is part of Cantera. See License.txt in the top-level directory or
// at https://cantera.org/license.txt for license and copyright information.
 
#ifndef EIGENSPARSEJACOBIAN_H
#define EIGENSPARSEJACOBIAN_H
 
#include "cantera/numerics/SystemJacobian.h"
#include "cantera/numerics/eigen_sparse.h"
 
namespace Cantera
{
 
//! System Jacobians that use Eigen sparse matrices for storage
class EigenSparseJacobian : public SystemJacobian
{
public:
    EigenSparseJacobian() = default;
    void initialize(size_t networkSize) override;
    void reset() override;
    void setValue(size_t row, size_t col, double value) override;
    void updatePreconditioner() override;
    void updateTransient(double rdt, int* mask) override;
 
    //! Set all Jacobian elements. Replaces the existing elements.
    void setFromTriplets(const vector<Eigen::Triplet<double>>& trips) {
        m_jac_trips = trips;
    }
 
    //! Return underlying Jacobian matrix
    //! @ingroup derivGroup
    Eigen::SparseMatrix<double> jacobian();
 
    //! Return the internal preconditioner matrix
    Eigen::SparseMatrix<double> matrix() {
        updatePreconditioner();
        return m_matrix;
    }
 
    void printPreconditioner() override;
 
    //! Print jacobian contents
    void printJacobian();
 
protected:
    //! Vector of triples representing the jacobian used in preconditioning
    vector<Eigen::Triplet<double>> m_jac_trips;
 
    //! Storage of appropriately sized identity matrix for making the preconditioner
    Eigen::SparseMatrix<double> m_identity;
 
    //! Container that is the sparse preconditioner
    Eigen::SparseMatrix<double> m_matrix;
};
 
}
 
#endif